Commits · 9d3fa6d081d15a543463bb85d7fcce768f4e0c6b · Sciencebeam / Sciencebeam Gym · GitLab

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Mar 20, 2018
- upgrade dependencies (including apache beam to 2.3.0) (#26) · 9d3fa6d0
  Daniel Ecer authored 7 years ago
```
* upgrade Apache Beam version

* do not inherit MockFileSystem from LocalFileSystem

* upgraded dependencies

* added pylint to dependencies

* addressed np.fromstring warning
```
  9d3fa6d0
- Merge pull request #25 from elifesciences/configure-pytest-cache-dir · 6fd4623b
  Daniel Ecer authored 7 years ago
```
specify pytest cache dir
```
  6fd4623b
- specify pytest cache dir · d478563b
  Daniel Ecer authored 7 years ago
  
  d478563b
- select contributors without type or type author (#24) · 3c960569
  Daniel Ecer authored 7 years ago
```
* select contributors without type or type author

* downgrade apache beam version
```
  3c960569
Feb 01, 2018
- Merge pull request #23 from elifesciences/more-granular-annot · 84edf3a0
  Daniel Ecer authored 7 years ago
```
more granular annot
```
  84edf3a0
- fixed token indices incorrect when str filter removes characters · bc0c2085
  Daniel Ecer authored 7 years ago
  
  bc0c2085
- treat asterisk as junk; treat repeating characters as junk · 20b389c3
  Daniel Ecer authored 7 years ago
  
  20b389c3
Jan 30, 2018
- fixed contrib-type at wrong level · 6bbdc0df
  Daniel Ecer authored 7 years ago
  
  6bbdc0df
- only extract dots after other special characters · 111f18e0
  Daniel Ecer authored 7 years ago
  
  111f18e0
- remove special characters from author name · 9d7f7a09
  Daniel Ecer authored 7 years ago
  
  9d7f7a09
- add contrib-type="author" to extracted authors · 78ac72a5
  Daniel Ecer authored 7 years ago
  
  78ac72a5
- extract author given-names and surname using sub tags · b06d0f6c
  Daniel Ecer authored 7 years ago
  
  b06d0f6c
Jan 29, 2018
- check that section_title is actually close to the paragraph found next · 2dac94ce
  Daniel Ecer authored 7 years ago
  
  2dac94ce
- also use amended version of python_2_unicode_compatible for matching annotator · 4767e80e
  Daniel Ecer authored 7 years ago
  
  4767e80e
- improved matching by extracting numbers from target annotations separately · 486263c5
  Daniel Ecer authored 7 years ago
  
  486263c5
- enabled previously accidentally disabled test · aaff460b
  Daniel Ecer authored 7 years ago
  
  aaff460b
- improved matching of addr-line by removing 'junk' before matching · 987a521a
  Daniel Ecer authored 7 years ago
  
  987a521a
- improved matching of last line of a block by taking into account whether a previous line matched · 97254547
  Daniel Ecer authored 7 years ago
  
  97254547
- log ids with match debug logger · 21281e45
  Daniel Ecer authored 7 years ago
  
  21281e45
- improved false matching of single reference items · abfbbf9b
  Daniel Ecer authored 7 years ago
  
  abfbbf9b
- added python_2_unicode_compatible with __repr__ support · 115fc077
  Daniel Ecer authored 7 years ago
  
  115fc077
- imporoved matching of section title by making it dependent on the next match · 88d586d8
  Daniel Ecer authored 7 years ago
  
  88d586d8
- fixed detail match logger not called after last match · 3bf1021e
  Daniel Ecer authored 7 years ago
  
  3bf1021e
- fixed ration not calculated correctly · 775687f2
  Daniel Ecer authored 7 years ago
  
  775687f2
Jan 26, 2018
- handle annotion appearing multiple times with begin prefix · 4805905f
  Daniel Ecer authored 7 years ago
  
  4805905f
- added sub annotations · 6ae6f3dd
  Daniel Ecer authored 7 years ago
  
  6ae6f3dd
Jan 19, 2018
- allow xml mapping filename to be overridden · 872569cc
  Daniel Ecer authored 7 years ago
  
  872569cc
- use begin tag prefix to identify beginnings of new entities · ba4c7b15
  Daniel Ecer authored 7 years ago
  
  ba4c7b15
- improved matching by stripping repeated whitespace · 46df38a8
  Daniel Ecer authored 7 years ago
  
  46df38a8
- added test for normalise_str · 4cc63456
  Daniel Ecer authored 7 years ago
  
  4cc63456
- removed unused imports · 3a1ef17c
  Daniel Ecer authored 7 years ago
  
  3a1ef17c
- moved fuzzy_match to separate module · a30ef29d
  Daniel Ecer authored 7 years ago
  
  a30ef29d
- moved target annotation and parsing to separate module · 2cbb0433
  Daniel Ecer authored 7 years ago
  
  2cbb0433
- moved annotation related modules to separate package · 5edbaac0
  Daniel Ecer authored 7 years ago
  
  5edbaac0
- ignore configparser pylint import warning · ab8697dd
  Daniel Ecer authored 7 years ago
  
  ab8697dd
- improved tagging by avoiding partial matches not supported by the next line · e62067a2
  Daniel Ecer authored 7 years ago
  
  e62067a2
- improved author matching by also ignoring dot after a letter · 88466d39
  Daniel Ecer authored 7 years ago
  
  88466d39
- fixed typo in output page filename · 9bab41d9
  Daniel Ecer authored 7 years ago
  
  9bab41d9
Jan 18, 2018
- Merge pull request #21 from elifesciences/use-cv-tag-scope-by-default · 2fafc979
  Daniel Ecer authored 7 years ago
```
use cv and crf tag scope by default
```
  2fafc979
- use crf tag by default · 4a594cfc
  Daniel Ecer authored 7 years ago
  
  4a594cfc