- Jan 30, 2020
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dependabot-preview[bot] authored
Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 1.15.0 to 1.15.2. - [Release notes](https://github.com/tensorflow/tensorflow/releases) - [Changelog](https://github.com/tensorflow/tensorflow/blob/v1.15.2/RELEASE.md) - [Commits](https://github.com/tensorflow/tensorflow/compare/v1.15.0...v1.15.2 ) Signed-off-by:
dependabot-preview[bot] <support@dependabot.com>
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- Jan 21, 2020
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dependabot-preview[bot] authored
Bumps [tensorflow-transform](https://github.com/tensorflow/transform) from 0.15.0 to 0.21.0. - [Release notes](https://github.com/tensorflow/transform/releases) - [Changelog](https://github.com/tensorflow/transform/blob/master/RELEASE.md) - [Commits](https://github.com/tensorflow/transform/compare/v0.15.0...v0.21.0 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [numpy](https://github.com/numpy/numpy) from 1.16.5 to 1.18.1. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/master/doc/HOWTO_RELEASE.rst.txt) - [Commits](https://github.com/numpy/numpy/compare/v1.16.5...v1.18.1 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [pytest](https://github.com/pytest-dev/pytest) from 5.3.2 to 5.3.4. - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/master/CHANGELOG.rst) - [Commits](https://github.com/pytest-dev/pytest/compare/5.3.2...5.3.4 ) Signed-off-by:
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- Jan 17, 2020
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dependabot-preview[bot] authored
Bumps [gunicorn](https://github.com/benoitc/gunicorn) from 19.9.0 to 20.0.4. - [Release notes](https://github.com/benoitc/gunicorn/releases) - [Commits](https://github.com/benoitc/gunicorn/compare/19.9.0...20.0.4 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.36.1 to 4.41.1. - [Release notes](https://github.com/tqdm/tqdm/releases) - [Commits](https://github.com/tqdm/tqdm/compare/v4.36.1...v4.41.1 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [lxml](https://github.com/lxml/lxml) from 4.4.1 to 4.4.2. - [Release notes](https://github.com/lxml/lxml/releases) - [Changelog](https://github.com/lxml/lxml/blob/master/CHANGES.txt) - [Commits](https://github.com/lxml/lxml/compare/lxml-4.4.1...lxml-4.4.2 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [tensorflow-transform](https://github.com/tensorflow/transform) from 0.14.0 to 0.15.0. - [Release notes](https://github.com/tensorflow/transform/releases) - [Changelog](https://github.com/tensorflow/transform/blob/master/RELEASE.md) - [Commits](https://github.com/tensorflow/transform/compare/v0.14.0...v0.15.0 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [six](https://github.com/benjaminp/six) from 1.12.0 to 1.14.0. - [Release notes](https://github.com/benjaminp/six/releases) - [Changelog](https://github.com/benjaminp/six/blob/master/CHANGES) - [Commits](https://github.com/benjaminp/six/compare/1.12.0...1.14.0 ) Signed-off-by:
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Daniel Ecer authored
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dependabot-preview[bot] authored
* Bump pylint from 2.3.1 to 2.4.4 Bumps [pylint](https://github.com/PyCQA/pylint) from 2.3.1 to 2.4.4. - [Release notes](https://github.com/PyCQA/pylint/releases) - [Changelog](https://github.com/PyCQA/pylint/blob/master/ChangeLog) - [Commits](https://github.com/PyCQA/pylint/compare/pylint-2.3.1...pylint-2.4.4 ) Signed-off-by:
Daniel Ecer <de-code@users.noreply.github.com>
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dependabot-preview[bot] authored
Bumps [flake8](https://gitlab.com/pycqa/flake8) from 3.7.8 to 3.7.9. - [Release notes](https://gitlab.com/pycqa/flake8/tags) - [Commits](https://gitlab.com/pycqa/flake8/compare/3.7.8...3.7.9 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [pytest](https://github.com/pytest-dev/pytest) from 5.1.2 to 5.3.2. - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/master/CHANGELOG.rst) - [Commits](https://github.com/pytest-dev/pytest/compare/5.1.2...5.3.2 ) Signed-off-by:
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- Jan 07, 2020
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dependabot[bot] authored
* Bump tensorflow from 1.14.0 to 1.15.0 Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 1.14.0 to 1.15.0. - [Release notes](https://github.com/tensorflow/tensorflow/releases) - [Changelog](https://github.com/tensorflow/tensorflow/blob/master/RELEASE.md) - [Commits](https://github.com/tensorflow/tensorflow/compare/v1.14.0...v1.15.0 ) Signed-off-by:
dependabot[bot] <support@github.com> * bumps version of docker image from 3.6.9 to 3.6.10 * upgrades pip inside docker * fixing astroid and pylint versions to avoid false positives Co-authored-by:
LSH <lsh-0@users.noreply.github.com>
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- Sep 19, 2019
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dependabot-preview[bot] authored
Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.35.0 to 4.36.1. - [Release notes](https://github.com/tqdm/tqdm/releases) - [Commits](https://github.com/tqdm/tqdm/compare/v4.35.0...v4.36.1 ) Signed-off-by:
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- Sep 09, 2019
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Daniel Ecer authored
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Daniel Ecer authored
* ugraded to python 3 * upgrade pylint and pytest * replaced StandardError * exclude useless-object-inheritance * python3 compatibilities uncovered by linting * fixed tests * fixed more python3 test incompatibilities
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Daniel Ecer authored
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- Aug 30, 2019
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dependabot-preview[bot] authored
Bumps [numpy](https://github.com/numpy/numpy) from 1.16.4 to 1.16.5. - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/master/doc/HOWTO_RELEASE.rst.txt) - [Commits](https://github.com/numpy/numpy/compare/v1.16.4...v1.16.5 ) Signed-off-by:
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- Aug 27, 2019
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Daniel Ecer authored
* refactored dev make targets * added MatchingAnnotatorConfig * extracted ratio constants * added get_simple_fuzzy_match_filter
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dependabot-preview[bot] authored
Bumps [sciencebeam-alignment](https://github.com/elifesciences/sciencebeam-alignment) from 0.0.3 to 0.0.4. - [Release notes](https://github.com/elifesciences/sciencebeam-alignment/releases) - [Commits](https://github.com/elifesciences/sciencebeam-alignment/compare/v0.0.3...v0.0.4 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.34.0 to 4.35.0. - [Release notes](https://github.com/tqdm/tqdm/releases) - [Commits](https://github.com/tqdm/tqdm/compare/v4.34.0...v4.35.0 ) Signed-off-by:
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- Aug 23, 2019
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dependabot-preview[bot] authored
Bumps [sciencebeam-alignment](https://github.com/elifesciences/sciencebeam-alignment) from 0.0.2 to 0.0.3. - [Release notes](https://github.com/elifesciences/sciencebeam-alignment/releases) - [Commits](https://github.com/elifesciences/sciencebeam-alignment/compare/v0.0.2...v0.0.3 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [apache-beam](https://github.com/apache/beam) from 2.14.0 to 2.15.0. - [Release notes](https://github.com/apache/beam/releases) - [Commits](https://github.com/apache/beam/compare/v2.14.0...v2.15.0 ) Signed-off-by:
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- Aug 21, 2019
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dependabot-preview[bot] authored
* Bump sciencebeam-utils from 0.0.6 to 0.1.0 Bumps [sciencebeam-utils](https://github.com/elifesciences/sciencebeam-utils) from 0.0.6 to 0.1.0. - [Release notes](https://github.com/elifesciences/sciencebeam-utils/releases) - [Commits](https://github.com/elifesciences/sciencebeam-utils/compare/v0.0.6...v0.1.0 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [nltk](https://github.com/nltk/nltk) from 3.4.4 to 3.4.5. - [Release notes](https://github.com/nltk/nltk/releases) - [Changelog](https://github.com/nltk/nltk/blob/develop/ChangeLog) - [Commits](https://github.com/nltk/nltk/compare/3.4.4...3.4.5 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [pytest](https://github.com/pytest-dev/pytest) from 4.6.2 to 4.6.5. - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/master/CHANGELOG.rst) - [Commits](https://github.com/pytest-dev/pytest/compare/4.6.2...4.6.5 ) Signed-off-by:
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- Aug 20, 2019
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dependabot-preview[bot] authored
Bumps [tensorflow-transform](https://github.com/tensorflow/transform) from 0.13.0 to 0.14.0. - [Release notes](https://github.com/tensorflow/transform/releases) - [Changelog](https://github.com/tensorflow/transform/blob/master/RELEASE.md) - [Commits](https://github.com/tensorflow/transform/compare/v0.13.0...v0.14.0 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [lxml](https://github.com/lxml/lxml) from 4.4.0 to 4.4.1. - [Release notes](https://github.com/lxml/lxml/releases) - [Changelog](https://github.com/lxml/lxml/blob/master/CHANGES.txt) - [Commits](https://github.com/lxml/lxml/compare/lxml-4.4.0...lxml-4.4.1 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.32.2 to 4.34.0. - [Release notes](https://github.com/tqdm/tqdm/releases) - [Commits](https://github.com/tqdm/tqdm/compare/v4.32.2...v4.34.0 ) Signed-off-by:
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- Aug 05, 2019
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dependabot-preview[bot] authored
Bumps [tensorflow](https://github.com/tensorflow/tensorflow) from 1.13.1 to 1.14.0. - [Release notes](https://github.com/tensorflow/tensorflow/releases) - [Changelog](https://github.com/tensorflow/tensorflow/blob/v1.14.0/RELEASE.md) - [Commits](https://github.com/tensorflow/tensorflow/compare/v1.13.1...v1.14.0 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [nltk](https://github.com/nltk/nltk) from 3.4.3 to 3.4.4. - [Release notes](https://github.com/nltk/nltk/releases) - [Changelog](https://github.com/nltk/nltk/blob/develop/ChangeLog) - [Commits](https://github.com/nltk/nltk/commits ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.32.1 to 4.32.2. - [Release notes](https://github.com/tqdm/tqdm/releases) - [Commits](https://github.com/tqdm/tqdm/compare/v4.32.1...v4.32.2 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [flask](https://github.com/pallets/flask) from 1.0.3 to 1.1.1. - [Release notes](https://github.com/pallets/flask/releases) - [Changelog](https://github.com/pallets/flask/blob/master/CHANGES.rst) - [Commits](https://github.com/pallets/flask/compare/1.0.3...1.1.1 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [flake8](https://gitlab.com/pycqa/flake8) from 3.7.7 to 3.7.8. - [Release notes](https://gitlab.com/pycqa/flake8/tags) - [Commits](https://gitlab.com/pycqa/flake8/compare/3.7.7...3.7.8 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [lxml](https://github.com/lxml/lxml) from 4.3.4 to 4.4.0. - [Release notes](https://github.com/lxml/lxml/releases) - [Changelog](https://github.com/lxml/lxml/blob/master/CHANGES.txt) - [Commits](https://github.com/lxml/lxml/compare/lxml-4.3.4...lxml-4.4.0 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [apache-beam](https://github.com/apache/beam) from 2.13.0 to 2.14.0. - [Release notes](https://github.com/apache/beam/releases) - [Commits](https://github.com/apache/beam/compare/v2.13.0...v2.14.0 ) Signed-off-by:
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dependabot-preview[bot] authored
Bumps [sciencebeam-utils](https://github.com/elifesciences/sciencebeam-utils) from 0.0.5 to 0.0.6. - [Release notes](https://github.com/elifesciences/sciencebeam-utils/releases) - [Commits](https://github.com/elifesciences/sciencebeam-utils/compare/v0.0.5...v0.0.6 ) Signed-off-by:
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- Jun 10, 2019
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Daniel Ecer authored
* minor model training logging improvement * make port configurable * added autocut-start-cloud
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Daniel Ecer authored
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